Genome-wide SNP Database for Marker-assisted Background Selection in Tomato
نویسندگان
چکیده
منابع مشابه
Genomic selection: marker assisted selection on a genome wide scale.
Genomic selection (GS) has become a very intense field of research during recent years. GS may be defined as the simultaneous selection for many (tens or hundreds of thousands of) markers, which cover the entire genome in a dense manner so that all genes are expected to be in linkage disequilibrium with at least some of the markers. In a sense, GS is marker assisted selection on a genome wide s...
متن کاملSNP Marker Assisted Selection for Identification of Fusarium Resistant Melon Plants
Melon is an important crop cultivated in moderate climate regions of the world. One of the most important diseases of this plant is vascular wilt caused by Fusarium oxysporum f.sp. melonis (Fom). Infection of farm by this pathogen can result in huge damage around the world. Development of resistant varieties is the most effective method for disease control. Four races of 0, 1, 2 and 1,2 have be...
متن کاملA new model of multi-marker correlation for genome-wide tag SNP selection.
Tag SNP selection is an important problem in computational biology and genetics because a small set of tag SNP markers may help reduce the cost of genotyping and thus genome-wide association studies. Several methods for selecting a smallest possible set of tag SNPs based on different formulations of tag SNP selection (block-based or genome-wide) and mathematical models of marker correlation hav...
متن کاملA genome-wide scan to detect signatures of recent selection in Australian Merino sheep
Domestication and selection are processes that conserve the pattern of genetic diversities between and within populations. Identification of genomic regions that are targets of selection for phenotypic traits is one of the main aims of research in animal genetics. An approach for identifying divergently selected regions of the genome is to compare FST values among loci to estimate the genetic v...
متن کاملGenome-Wide SNP Genotyping to Infer the Effects on Gene Functions in Tomato
The genotype data of 7054 single nucleotide polymorphism (SNP) loci in 40 tomato lines, including inbred lines, F1 hybrids, and wild relatives, were collected using Illumina's Infinium and GoldenGate assay platforms, the latter of which was utilized in our previous study. The dendrogram based on the genotype data corresponded well to the breeding types of tomato and wild relatives. The SNPs wer...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Korean Journal of Breeding Science
سال: 2013
ISSN: 2287-5174
DOI: 10.9787/kjbs.2013.45.3.232